5XPT Transcription Metal Binding Protein date Jun 05, 2017
title Crystal Structure Of Mad2l2rev7 In Complex With A Camp Frag Tetragonal Crystal
authors K.Hara, S.Taharazako, H.Hashimoto
compound source
Molecule: Mitotic Spindle Assembly Checkpoint Protein Mad2b
Chain: A
Synonym: Mitotic Arrest Deficient 2-Like Protein 2,Mad2-Lik 2,Rev7 Homolog,Hrev7;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mad2l2, Mad2b, Rev7
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Chromosome Alignment-Maintaining Phosphoprotein 1
Chain: B
Fragment: Unp Residues 325-344
Synonym: Zinc Finger Protein 828
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Champ1, C13orf8, Camp, Champ, Kiaa1802, Znf828
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 4 2 2
R_factor 0.197 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.493 106.493 127.434 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
Gene
Ontology
ChainFunctionProcessComponent
A
  • positive regulation of doubl...

  • Primary referenceDynamic feature of mitotic arrest deficient 2-like protein 2 (MAD2L2) and structural basis for its interaction with chromosome alignment maintaining phosphoprotein (CAMP)., Hara K, Taharazako S, Ikeda M, Fujita H, Mikami Y, Kikuchi S, Hishiki A, Yokoyama H, Ishikawa Y, Kanno SI, Tanaka K, Hashimoto H, J Biol Chem. 2017 Sep 8. pii: jbc.M117.804237. doi: 10.1074/jbc.M117.804237. PMID:28887307
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (5xpt.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 5XPT
  • Structure Factors (862 Kb)
  • Retrieve 5XPT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XPT from S2C, [Save to disk]
  • View 5XPT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5XPT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5xpt from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xpt_A] [5xpt_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5XPT
  • Community annotation for 5XPT at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science