5XRA	Signaling Protein	date	Jun 08, 2017
title	Crystal Structure Of The Human Cb1 In Complex With Agonist A
authors	T.Hua, K.Vemuri, P.S.Nikas, R.B.Laprairie, Y.Wu, L.Qu, M.Pu, A.Kord J.H.Ho, G.W.Han, K.Ding, X.Li, H.Liu, M.A.Hanson, S.Zhao, L.M.Bohn A.Makriyannis, R.C.Stevens, Z.J.Liu
compound		source
Molecule: Cannabinoid Receptor 1,Flavodoxin,Cannabinoid Rec Chain: A Fragment: Unp Residues 99-306,Unp Residues 3-148,Unp Residu 414; Synonym: Cb1,Cann6,Cb1,Cann6 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens, Desulfovibrio Vulgaris ( Hildenborough Atcc 29579 Dsm 644 Ncimb 8303); Organism_common: Human Organism_taxid: 9606, 882 Strain: Hildenborough Atcc 29579 Dsm 644 Ncimb 8303 Gene: Cnr1, Cnr, Dvu_2680 Expression_system: Homo Sapiens Expression_system_taxid: 9606
symmetry	Space Group: P 21 2 21	R_factor 0.234 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 66.050 75.870 138.900 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	8D3, CLR, FMN, OLA, OLC, PEG	enzyme
Gene Ontology	Chain Function Process Component A electron transfer activity
Primary reference	Crystal structures of agonist-bound human cannabinoid receptor CB1., Hua T, Vemuri K, Nikas SP, Laprairie RB, Wu Y, Qu L, Pu M, Korde A, Jiang S, Ho JH, Han GW, Ding K, Li X, Liu H, Hanson MA, Zhao S, Bohn LM, Makriyannis A, Stevens RC, Liu ZJ, Nature. 2017 Jul 27;547(7664):468-471. doi: 10.1038/nature23272. Epub 2017 Jul 5. PMID:28678776

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk] Biological Unit Coordinates (5xra.pdb1.gz) 143 Kb LPC: Ligand-Protein Contacts for 5XRA CSU: Contacts of Structural Units for 5XRA Structure Factors (354 Kb) Retrieve 5XRA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5XRA from S2C, [Save to disk] Re-refined 5xra structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5XRA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5XRA

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5xra_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5XRA

Community annotation for 5XRA at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---