5XVR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4, TRH enzyme
Primary referenceStructural basis of protein arginine rhamnosylation by glycosyltransferase EarP., Sengoku T, Suzuki T, Dohmae N, Watanabe C, Honma T, Hikida Y, Yamaguchi Y, Takahashi H, Yokoyama S, Yanagisawa T, Nat Chem Biol. 2018 Feb 13. pii: 10.1038/s41589-018-0002-y. doi:, 10.1038/s41589-018-0002-y. PMID:29440735
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (277 Kb) [Save to disk]
  • Biological Unit Coordinates (5xvr.pdb1.gz) 138 Kb
  • Biological Unit Coordinates (5xvr.pdb2.gz) 137 Kb
  • Biological Unit Coordinates (5xvr.pdb3.gz) 271 Kb
  • LPC: Ligand-Protein Contacts for 5XVR
  • CSU: Contacts of Structural Units for 5XVR
  • Structure Factors (3321 Kb)
  • Retrieve 5XVR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XVR from S2C, [Save to disk]
    • View 5XVR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xvr_A] [5xvr_B]
  • SWISS-PROT database:

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