5XZX Transport Protein date Jul 14, 2017
title Crystal Structure Of Importin-Alpha3 Bound To The Nuclear Lo Signal Of Ran-Binding Protein 3
authors M.Koyama, Y.Matsuura
compound source
Molecule: Importin Subunit Alpha-3
Chain: A
Fragment: Unp Residues 70-485
Synonym: Importin Alpha Q1,Qip1,Karyopherin Subunit Alpha-4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kpna4, Qip1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Ran-Binding Protein 3
Chain: B
Fragment: Unp Residues 31-60
Synonym: Ranbp3-B
Engineered: Yes
Other_details: This Is A Fragment Of Isoform 3 Of Ran-Bindi 3, Also Known As Ranbp3-B.

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ranbp3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.227 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.970 60.220 85.020 90.00 100.54 90.00
method X-Ray Diffractionresolution 3.00 Å
Primary referenceCrystal structure of importin-alpha3 bound to the nuclear localization signal of Ran-binding protein 3., Koyama M, Matsuura Y, Biochem Biophys Res Commun. 2017 Sep 23;491(3):609-613. doi:, 10.1016/j.bbrc.2017.07.155. Epub 2017 Jul 29. PMID:28760339
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (5xzx.pdb1.gz) 137 Kb
  • CSU: Contacts of Structural Units for 5XZX
  • Structure Factors (426 Kb)
  • Retrieve 5XZX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XZX from S2C, [Save to disk]
  • View 5XZX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5XZX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xzx_A] [5xzx_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5XZX
  • Community annotation for 5XZX at PDBWiki (http://pdbwiki.org)

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