5Y0P date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand TAT enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceAcetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis., Taniguchi T, Miyauchi K, Sakaguchi Y, Yamashita S, Soma A, Tomita K, Suzuki T, Nat Chem Biol. 2018 Nov;14(11):1010-1020. doi: 10.1038/s41589-018-0119-z. Epub, 2018 Aug 27. PMID:30150682
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (276 Kb) [Save to disk]
  • Biological Unit Coordinates (5y0p.pdb1.gz) 269 Kb
  • LPC: Ligand-Protein Contacts for 5Y0P
  • CSU: Contacts of Structural Units for 5Y0P
  • Structure Factors (360 Kb)
  • Retrieve 5Y0P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5Y0P from S2C, [Save to disk]
  • View 5Y0P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5y0p_A] [5y0p_B]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science