5Y2T date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8LX enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructures of PPARgamma complexed with lobeglitazone and pioglitazone reveal key determinants for the recognition of antidiabetic drugs., Lee MA, Tan L, Yang H, Im YG, Im YJ, Sci Rep. 2017 Dec 4;7(1):16837. doi: 10.1038/s41598-017-17082-x. PMID:29203903
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (5y2t.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 5Y2T
  • CSU: Contacts of Structural Units for 5Y2T
  • Structure Factors (1617 Kb)
  • Retrieve 5Y2T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5Y2T from S2C, [Save to disk]
  • View 5Y2T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5y2t_A] [5y2t_B]
  • SWISS-PROT database:

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