5Y36	Hydrolase Rna Dna	date	Jul 27, 2017
title	Cryo-Em Structure Of Spcas9-Sgrna-Dna Ternary Complex
authors	Q.Huang, G.Li, C.Huai
compound		source
Molecule: Crispr-Associated Endonuclease Cas9csn1 Chain: A Synonym: Spcas9,Spycas9 Ec: 3.1.-.- Engineered: Yes Mutation: Yes		Organism_scientific: Streptococcus Pyogenes Serotype M1 Organism_taxid: 301447 Gene: Cas9, Csn1, Spy_1046 Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768 Expression_system_plasmid: Pet28a
Molecule: Single-Guide Rna Chain: B Engineered: Yes		Synthetic: Yes Organism_scientific: Mus Musculus Organism_taxid: 10090
Molecule: Complementary Dna Strand Chain: C Engineered: Yes		Synthetic: Yes Organism_scientific: Mus Musculus Organism_taxid: 10090
Molecule: Non-Complementary Dna Strand Chain: D Engineered: Yes		Synthetic: Yes Organism_scientific: Mus Musculus Organism_taxid: 10090
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	5.20 Å
ligand	MG	enzyme	Hydrolase E.C.3.1 BRENDA
Gene Ontology	Chain Function Process Component A nuclease activity endonuclease activity exonuclease activity 3'-5' exonuclease activity
Primary reference	Structural insights into DNA cleavage activation of CRISPR-Cas9 system., Huai C, Li G, Yao R, Zhang Y, Cao M, Kong L, Jia C, Yuan H, Chen H, Lu D, Huang Q, Nat Commun. 2017 Nov 9;8(1):1375. doi: 10.1038/s41467-017-01496-2. PMID:29123204

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (260 Kb) [Save to disk] Biological Unit Coordinates (5y36.pdb1.gz) 255 Kb LPC: Ligand-Protein Contacts for 5Y36 CSU: Contacts of Structural Units for 5Y36 Retrieve 5Y36 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5Y36 from S2C, [Save to disk]

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Visual 3D analysis of 5Y36

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 5y36 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5y36_A] [5y36_D] [5y36_B] [5y36_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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