5Y41 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, MG, PEG, PGE, RPG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePGE1 and PGA1 bind to Nurr1 and activate its transcriptional function., Rajan S, Jang Y, Kim CH, Kim W, Toh HT, Jeon J, Song B, Serra A, Lescar J, Yoo JY, Beldar S, Ye H, Kang C, Liu XW, Feitosa M, Kim Y, Hwang D, Goh G, Lim KL, Park HM, Lee CH, Oh SF, Petsko GA, Yoon HS, Kim KS, Nat Chem Biol. 2020 May 25. pii: 10.1038/s41589-020-0553-6. doi:, 10.1038/s41589-020-0553-6. PMID:32451509
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk]
  • Biological Unit Coordinates (5y41.pdb1.gz) 80 Kb
  • Biological Unit Coordinates (5y41.pdb2.gz) 81 Kb
  • Biological Unit Coordinates (5y41.pdb3.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 5Y41
  • CSU: Contacts of Structural Units for 5Y41
  • Structure Factors (979 Kb)
  • Retrieve 5Y41 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5Y41 from S2C, [Save to disk]
    • View 5Y41 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5y41_A] [5y41_B]
  • SWISS-PROT database:

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