5YA8		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	INS, NAD	enzyme
Gene Ontology	Chain Function Process Component A, B, D, C oxidoreductase activity
Primary reference	Structural basis of L-glucose oxidation by scyllo-inositol dehydrogenase: Implications for a novel enzyme subfamily classification., Fukano K, Ozawa K, Kokubu M, Shimizu T, Ito S, Sasaki Y, Nakamura A, Yajima S, PLoS One. 2018 May 25;13(5):e0198010. doi: 10.1371/journal.pone.0198010., eCollection 2018. PMID:29799855

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk] Biological Unit Coordinates (5ya8.pdb1.gz) 230 Kb LPC: Ligand-Protein Contacts for 5YA8 CSU: Contacts of Structural Units for 5YA8 Structure Factors (921 Kb) Retrieve 5YA8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YA8 from S2C, [Save to disk]

View 5YA8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ya8_A] [5ya8_B] [5ya8_C] [5ya8_D] SWISS-PROT database:

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