5YDM		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	DUW	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural Basis of a Broadly Selective Acyltransferase from the Polyketide Synthase of Splenocin., Li Y, Zhang W, Zhang H, Tian W, Wu L, Wang S, Zheng M, Zhang J, Sun C, Deng Z, Sun Y, Qu X, Zhou J, Angew Chem Int Ed Engl. 2018 May 14;57(20):5823-5827. doi:, 10.1002/anie.201802805. Epub 2018 Apr 14. PMID:29536601

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (5ydm.pdb1.gz) 64 Kb LPC: Ligand-Protein Contacts for 5YDM CSU: Contacts of Structural Units for 5YDM Structure Factors (417 Kb) Retrieve 5YDM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YDM from S2C, [Save to disk]

View 5YDM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ydm_A] SWISS-PROT database:

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