5YDR		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	PO4, ZN	enzyme
Primary reference	Structural and mechanistic insights into UHRF1-mediated DNMT1 activation in the maintenance DNA methylation., Li T, Wang L, Du Y, Xie S, Yang X, Lian F, Zhou Z, Qian C, Nucleic Acids Res. 2018 Apr 6;46(6):3218-3231. doi: 10.1093/nar/gky104. PMID:29471350

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (5ydr.pdb1.gz) 67 Kb LPC: Ligand-Protein Contacts for 5YDR CSU: Contacts of Structural Units for 5YDR Structure Factors (993 Kb) Retrieve 5YDR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YDR from S2C, [Save to disk]

View 5YDR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ydr_A] [5ydr_B] [5ydr_D] SWISS-PROT database:

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