5YDU date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and RNA recognition of ribosome assembly factor Utp30., Hu J, Zhu X, Ye K, RNA. 2017 Sep 26. pii: rna.062695.117. doi: 10.1261/rna.062695.117. PMID:28951391
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (5ydu.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (5ydu.pdb2.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 5YDU
  • CSU: Contacts of Structural Units for 5YDU
  • Structure Factors (333 Kb)
  • Retrieve 5YDU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YDU from S2C, [Save to disk]
  • View 5YDU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ydu_A] [5ydu_B]
  • SWISS-PROT database:

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