5YE8	Hydrolase Hydrolase Inhibitor	date	Sep 15, 2017
title	The Crystal Structure Of Lp-Pla2 In Complex With A Novel Inh
authors	Q.F.Liu, Y.C.Xu
compound		source
Molecule: Platelet-Activating Factor Acetylhydrolase Chain: B, A Fragment: Unp Residues 47-429 Synonym: Lp-Pla2,Paf Acetylhydrolase,1-Alkyl-2- Acetylglycerophosphocholine Esterase,2-Acetyl-1- Alkylglycerophosphocholine Esterase,Group-Viia Phospholipas Gviia-Pla2,Ldl-Associated Phospholipase A2,Ldl-Pla(2),Paf 2 Acylhydrolase; Ec: 3.1.1.47 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pla2g7, Pafah Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.181 R_Free 0.212
crystal cell	length a length b length c angle alpha angle beta angle gamma 115.869 82.772 96.655 90.00 115.25 90.00
method	X-Ray Diffraction	resolution	1.85 Å
ligand	8U3	enzyme	Hydrolase E.C.3.1.1.47 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure-Guided Discovery of Novel, Potent, and Orally Bioavailable Inhibitors of Lipoprotein-Associated Phospholipase A2., Liu Q, Huang F, Yuan X, Wang K, Zou Y, Shen J, Xu Y, J Med Chem. 2017 Dec 28;60(24):10231-10244. doi: 10.1021/acs.jmedchem.7b01530., Epub 2017 Dec 15. PMID:29193967

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk] Biological Unit Coordinates (5ye8.pdb1.gz) 61 Kb Biological Unit Coordinates (5ye8.pdb2.gz) 62 Kb LPC: Ligand-Protein Contacts for 5YE8 CSU: Contacts of Structural Units for 5YE8 Structure Factors (2865 Kb) Retrieve 5YE8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YE8 from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ye8_A] [5ye8_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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