5YEF	Dna Binding Protein Dna	date	Sep 17, 2017
title	Crystal Structure Of Ctcf Zfs2-8-Hs5-1ae
authors	M.Yin, J.Wang, M.Wang, X.Li, Y.Wang
compound		source
Molecule: Transcriptional Repressor Ctcf Chain: A, B, G, J Fragment: Unp Residues 292-490 Synonym: 11-Zinc Finger Protein,Ccctc-Binding Factor,Ctcfl Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ctcf Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (27-Mer) Chain: C, E, H, K Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Dna (27-Mer) Chain: D, F, I, L Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 1 21 1	R_factor 0.224 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.115 143.064 90.233 90.00 119.69 90.00
method	X-Ray Diffraction	resolution	2.81 Å
ligand	ZN	enzyme
Primary reference	Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites., Yin M, Wang J, Wang M, Li X, Zhang M, Wu Q, Wang Y, Cell Res. 2017 Nov;27(11):1365-1377. doi: 10.1038/cr.2017.131. Epub 2017 Oct 27. PMID:29076501

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (415 Kb) [Save to disk] Biological Unit Coordinates (5yef.pdb1.gz) 103 Kb Biological Unit Coordinates (5yef.pdb2.gz) 102 Kb Biological Unit Coordinates (5yef.pdb3.gz) 102 Kb Biological Unit Coordinates (5yef.pdb4.gz) 102 Kb LPC: Ligand-Protein Contacts for 5YEF CSU: Contacts of Structural Units for 5YEF Structure Factors (1284 Kb) Retrieve 5YEF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YEF from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yef_D] [5yef_C] [5yef_F] [5yef_E] [5yef_B] [5yef_G] [5yef_J] [5yef_I] [5yef_H] [5yef_A] [5yef_L] [5yef_K] SWISS-PROT database: Domain organization of by SWISSPFAM

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