5YEP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A, D, C


Primary referenceStructure-function analyses reveal the molecular architecture and neutralization mechanism of a bacterial HEPN-MNT toxin-antitoxin system., Jia X, Yao J, Gao Z, Liu G, Dong YH, Wang X, Zhang H, J Biol Chem. 2018 May 4;293(18):6812-6823. doi: 10.1074/jbc.RA118.002421. Epub, 2018 Mar 19. PMID:29555683
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (5yep.pdb1.gz) 83 Kb
  • LPC: Ligand-Protein Contacts for 5YEP
  • CSU: Contacts of Structural Units for 5YEP
  • Structure Factors (290 Kb)
  • Retrieve 5YEP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YEP from S2C, [Save to disk]
  • View 5YEP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yep_A] [5yep_B] [5yep_C] [5yep_D]
  • SWISS-PROT database:

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