5YIA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8V9, CPS, GOL, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDeciphering the mechanism of potent peptidomimetic inhibitors targeting plasmepsins - biochemical and structural insights., Mishra V, Rathore I, Arekar A, Sthanam LK, Xiao H, Kiso Y, Sen S, Patankar S, Gustchina A, Hidaka K, Wlodawer A, Yada RY, Bhaumik P, FEBS J. 2018 Jun 26. doi: 10.1111/febs.14598. PMID:29943906
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (5yia.pdb1.gz) 113 Kb
  • LPC: Ligand-Protein Contacts for 5YIA
  • CSU: Contacts of Structural Units for 5YIA
  • Structure Factors (735 Kb)
  • Retrieve 5YIA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YIA from S2C, [Save to disk]
  • View 5YIA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yia_A]
  • SWISS-PROT database:

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