5YJJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MG, PO4	enzyme
Gene Ontology	Chain Function Process Component E, A, C, D, B, F
Primary reference	Characterization of Staphylococcus epidermidis Polynucleotide phosphorylase and its interactions with ribonucleases RNase J1 and RNase J2., Raj R, Mitra S, Gopal B, Biochem Biophys Res Commun. 2018 Jan 8;495(2):2078-2084. doi:, 10.1016/j.bbrc.2017.12.056. Epub 2017 Dec 11. PMID:29242153

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (436 Kb) [Save to disk] Biological Unit Coordinates (5yjj.pdb1.gz) 215 Kb Biological Unit Coordinates (5yjj.pdb2.gz) 214 Kb LPC: Ligand-Protein Contacts for 5YJJ CSU: Contacts of Structural Units for 5YJJ Structure Factors (9757 Kb) Retrieve 5YJJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YJJ from S2C, [Save to disk]

View 5YJJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yjj_A] [5yjj_B] [5yjj_C] [5yjj_D] [5yjj_E] [5yjj_F] SWISS-PROT database:

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