5YKF	Membrane Protein	date	Oct 14, 2017
title	Structure Of Pancreatic Atp-Sensitive Potassium Channel Boun Glibenclamide And Atpgammas (3d Class1 At 4.33a)
authors	L.Chen, J.X.Wu
compound		source
Molecule: Atp-Sensitive Inward Rectifier Potassium Channel Chain: A, C, E, G Synonym: Inward Rectifier K(+) Channel Kir6.2,Potassium Cha Inwardly Rectifying Subfamily J Member 11; Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Kcnj11 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606
Molecule: Atp-Binding Cassette Sub-Family C Member 8 Isofor Chain: B, D, F, H Engineered: Yes		Organism_scientific: Mesocricetus Auratus Organism_common: Golden Hamster Organism_taxid: 10036 Gene: Abcc8 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	4.33 Å
ligand	AGS, GBM	enzyme
Gene Ontology	Chain Function Process Component A, E, C, G ATP-activated inward rectifi... F, B, H, D
Primary reference	Ligand binding and conformational changes of SUR1 subunit in pancreatic ATP-sensitive potassium channels., Wu JX, Ding D, Wang M, Kang Y, Zeng X, Chen L, Protein Cell. 2018 Mar 28. pii: 10.1007/s13238-018-0530-y. doi:, 10.1007/s13238-018-0530-y. PMID:29594720

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1015 Kb) [Save to disk] Biological Unit Coordinates (5ykf.pdb1.gz) 1001 Kb LPC: Ligand-Protein Contacts for 5YKF CSU: Contacts of Structural Units for 5YKF Retrieve 5YKF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YKF from S2C, [Save to disk]

View 5YKF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5YKF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ykf_E] [5ykf_A] [5ykf_H] [5ykf_G] [5ykf_B] [5ykf_F] [5ykf_D] [5ykf_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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