5YTK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand LEU, LYS, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
E, F, B, A, C, D


Primary referenceSensing and Transmitting Intracellular Amino Acid Signals through Reversible Lysine Aminoacylations., He XD, Gong W, Zhang JN, Nie J, Yao CF, Guo FS, Lin Y, Wu XH, Li F, Li J, Sun WC, Wang ED, An YP, Tang HR, Yan GQ, Yang PY, Wei Y, Mao YZ, Lin PC, Zhao JY, Xu Y, Xu W, Zhao SM, Cell Metab. 2017 Nov 27. pii: S1550-4131(17)30629-0. doi:, 10.1016/j.cmet.2017.10.015. PMID:29198988
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (550 Kb) [Save to disk]
  • Biological Unit Coordinates (5ytk.pdb1.gz) 536 Kb
  • LPC: Ligand-Protein Contacts for 5YTK
  • CSU: Contacts of Structural Units for 5YTK
  • Structure Factors (332 Kb)
  • Retrieve 5YTK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YTK from S2C, [Save to disk]
    • View 5YTK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ytk_A] [5ytk_B] [5ytk_C] [5ytk_D] [5ytk_E] [5ytk_F] [5ytk_G] [5ytk_J] [5ytk_K] [5ytk_L]
  • SWISS-PROT database:

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