5YYF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FOA, NH2, PHQ, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, A


Primary referenceStructure-guided development of YEATS domain inhibitors by targeting pi-pi-pi stacking., Li X, Li XM, Jiang Y, Liu Z, Cui Y, Fung KY, van der Beelen SHE, Tian G, Wan L, Shi X, Allis CD, Li H, Li Y, Li XD, Nat Chem Biol. 2018 Dec;14(12):1140-1149. doi: 10.1038/s41589-018-0144-y. Epub, 2018 Oct 29. PMID:30374167
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (5yyf.pdb1.gz) 29 Kb
  • Biological Unit Coordinates (5yyf.pdb2.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 5YYF
  • CSU: Contacts of Structural Units for 5YYF
  • Structure Factors (697 Kb)
  • Retrieve 5YYF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YYF from S2C, [Save to disk]
  • View 5YYF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yyf_A] [5yyf_B] [5yyf_C] [5yyf_D]
  • SWISS-PROT database:

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