5Z62 Electron Transport date Jan 22, 2018
title Structure Of Human Cytochrome C Oxidase
authors J.Gu, S.Zong, M.Wu, M.Yang
compound source
Molecule: Cytochrome C Oxidase Subunit 1
Chain: A
Synonym: Cytochrome C Oxidase Polypeptide I
Ec: 1.9.3.1
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 2
Chain: B
Synonym: Cytochrome C Oxidase Polypeptide II

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 3
Chain: C
Synonym: Cytochrome C Oxidase Polypeptide III

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 4 Isoform 1, Mitocho
Chain: D
Synonym: Cytochrome C Oxidase Polypeptide Iv,Cytochrome C O Subunit Iv Isoform 1,Cox Iv-1;

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 5a, Mitochondrial
Chain: E
Synonym: Cytochrome C Oxidase Polypeptide Va

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 5b, Mitochondrial
Chain: F
Synonym: Cytochrome C Oxidase Polypeptide Vb

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 6a1, Mitochondrial
Chain: G
Synonym: Cytochrome C Oxidase Polypeptide Via-Liver,Cytochr Oxidase Subunit Via-Liver,Cox Via-L;

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 6b1
Chain: H
Fragment: Unp Residues 5-86
Synonym: Cytochrome C Oxidase Subunit Vib Isoform 1,Cox Vib

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 6c
Chain: I
Synonym: Cytochrome C Oxidase Polypeptide Vic

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 7a2, Mitochondrial
Chain: J
Synonym: Cytochrome C Oxidase Subunit Viia-Liverheart,Cyto Oxidase Subunit Viial;

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 7b, Mitochondrial
Chain: K
Synonym: Cytochrome C Oxidase Polypeptide Viib

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 7c, Mitochondrial
Chain: L
Synonym: Cytochrome C Oxidase Polypeptide Viic

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit 8a, Mitochondrial
Chain: M
Synonym: Cytochrome C Oxidase Polypeptide Viii-Liverheart, C Oxidase Subunit 8-2;

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Cytochrome C Oxidase Subunit Ndufa4
Chain: N

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.60 Å
ligand
enzyme Oxidoreductase E.C.1.9.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B
  • cytochrome-c oxidase activit...


  • C
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


  • D


    E


    F


    G


    H
  • cytochrome-c oxidase activit...


  • I
  • cytochrome-c oxidase activit...


  • J


    K


    L


    M


    N
  • cytochrome-c oxidase activit...


  • Primary referenceStructure of the intact 14-subunit human cytochrome c oxidase., Zong S, Wu M, Gu J, Liu T, Guo R, Yang M, Cell Res. 2018 Oct;28(10):1026-1034. doi: 10.1038/s41422-018-0071-1. Epub 2018, Jul 20. PMID:30030519
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (283 Kb) [Save to disk]
  • Biological Unit Coordinates (5z62.pdb1.gz) 274 Kb
  • CSU: Contacts of Structural Units for 5Z62
  • Retrieve 5Z62 in mmCIF format [Save to disk]
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  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5z62 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5z62_B] [5z62_G] [5z62_F] [5z62_M] [5z62_C] [5z62_H] [5z62_D] [5z62_L] [5z62_I] [5z62_N] [5z62_K] [5z62_E] [5z62_J] [5z62_A]
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  • Community annotation for 5Z62 at PDBWiki (http://pdbwiki.org)

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