5Z75 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 2PE, NAD, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B, C, D


Primary referenceBenchmark Analysis of Native and Artificial NAD(+)-Dependent Enzymes Generated by a Sequence-Based Design Method with or without Phylogenetic Data., Nakano S, Motoyama T, Miyashita Y, Ishizuka Y, Matsuo N, Tokiwa H, Shinoda S, Asano Y, Ito S, Biochemistry. 2018 Jul 3;57(26):3722-3732. doi: 10.1021/acs.biochem.8b00339. Epub, 2018 Jun 4. PMID:29787243
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (216 Kb) [Save to disk]
  • Biological Unit Coordinates (5z75.pdb1.gz) 106 Kb
  • Biological Unit Coordinates (5z75.pdb2.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 5Z75
  • CSU: Contacts of Structural Units for 5Z75
  • Structure Factors (2082 Kb)
  • Retrieve 5Z75 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5Z75 from S2C, [Save to disk]
  • View 5Z75 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5z75_A] [5z75_B] [5z75_C] [5z75_D]
  • SWISS-PROT database:

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