5Z7R Crystal structure of crotonase from Clostridium acetobutylicum date
authors Kim, E.J., Kim, Y.J., Kim, K.J.
compound source
symmetry
R_factor
R_Free 0.2575
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructural insights into substrate specificity of crotonase from the n-butanol producing bacterium Clostridium acetobutylicum., Kim EJ, Kim YJ, Kim KJ, Biochem Biophys Res Commun. 2014 Aug 29;451(3):431-5. doi:, 10.1016/j.bbrc.2014.07.139. Epub 2014 Aug 7. PMID:25110148
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (123 Kb) [Save to disk]
  • Biological Unit Coordinates (5z7r.pdb1.gz) 230 Kb
  • CSU: Contacts of Structural Units for 5Z7R
  • Structure Factors (1112 Kb)
  • Retrieve 5Z7R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5Z7R from S2C, [Save to disk]
  • View 5Z7R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5Z7R
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5z7r from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5z7r_C] [5z7r_A] [5z7r_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5Z7R
  • Community annotation for 5Z7R at PDBWiki (http://pdbwiki.org)

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