5ZGD Rna Binding Protein date Mar 08, 2018
title Hnrnpa1 Reversible Amyloid Core Gfggndnfg (Residues 209-217) Determined By X-Ray
authors X.Gui, M.Xie, M.Zhao, F.Luo, J.He, D.Li, C.Liu
compound source
Molecule: Gly-Phe-Gly-Gly-Asn-Asp-Asn-Phe-Gly
Chain: A
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.122 R_Free 0.159
crystal
cell
length a length b length c angle alpha angle beta angle gamma
4.869 27.263 35.311 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.40 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (5 Kb) [Save to disk]
  • Biological Unit Coordinates (5zgd.pdb1.gz) 2 Kb
  • CSU: Contacts of Structural Units for 5ZGD
  • Structure Factors (23 Kb)
  • Retrieve 5ZGD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZGD from S2C, [Save to disk]
    • View 5ZGD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5ZGD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zgd_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5ZGD
  • Community annotation for 5ZGD at PDBWiki (http://pdbwiki.org)

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