5ZHU Transcription date Mar 13, 2018
title Crystal Structure Of The Dna-Binding Domain Of Human Myelin- Regulatory Factor
authors B.Chen, Y.Zhu, S.Ye, R.Zhang
compound source
Molecule: Myelin Regulatory Factor
Chain: A, B, C
Fragment: Dna-Binding Domain
Synonym: Myelin Gene Regulatory Factor
Ec: 3.4.-.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Myrf, C11orf9, Kiaa0954, Mrf
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 3
R_factor 0.228 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
107.414 107.414 48.432 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
ligand
enzyme Hydrolase E.C.3.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructure of the DNA-binding domain of human myelin-gene regulatory factor reveals its potential protein-DNA recognition mode., Chen B, Zhu Y, Ye S, Zhang R, J Struct Biol. 2018 May 2. pii: S1047-8477(18)30115-1. doi:, 10.1016/j.jsb.2018.04.007. PMID:29729323
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (5zhu.pdb1.gz) 33 Kb
  • Biological Unit Coordinates (5zhu.pdb2.gz) 33 Kb
  • Biological Unit Coordinates (5zhu.pdb3.gz) 32 Kb
  • CSU: Contacts of Structural Units for 5ZHU
  • Structure Factors (830 Kb)
  • Retrieve 5ZHU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZHU from S2C, [Save to disk]
  • View 5ZHU in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5ZHU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5zhu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zhu_B] [5zhu_C] [5zhu_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5ZHU
  • Community annotation for 5ZHU at PDBWiki (http://pdbwiki.org)

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