5ZTM	Hydrolase Rna	date	May 04, 2018
title	Crystal Structure Of Mle Dsrbds In Complex With Rox2 (R2h1)
authors	M.Q.Lv, Y.J.Tang
compound		source
Molecule: Dosage Compensation Regulator Chain: A, B Fragment: Dsrna-Binding Domain Synonym: Rna Helicase Maleless,Atp-Dependent Rna Helicase M Male-Less,Protein Maleless,Protein No Action Potential; Ec: 3.6.4.13 Engineered: Yes		Organism_scientific: Drosophila Melanogaster Organism_common: Fruit Fly Organism_taxid: 7227 Gene: Mle, Nap, Cg11680 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008
Molecule: Non-Coding Mrna Sequence Rox2 Chain: C		Organism_scientific: Drosophila Melanogaster Organism_taxid: 7227
symmetry	Space Group: H 3 2	R_factor 0.191 R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma 108.479 108.479 347.061 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.90 Å
ligand	GTP	enzyme	Hydrolase E.C.3.6.4.13 BRENDA
Primary reference	Structural insights reveal the specific recognition of roX RNA by the dsRNA-binding domains of the RNA helicase MLE and its indispensable role in dosage compensation in Drosophila., Lv M, Yao Y, Li F, Xu L, Yang L, Gong Q, Xu YZ, Shi Y, Fan YJ, Tang Y, Nucleic Acids Res. 2019 Jan 15. pii: 5289492. doi: 10.1093/nar/gky1308. PMID:30649456

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk] Biological Unit Coordinates (5ztm.pdb1.gz) 146 Kb LPC: Ligand-Protein Contacts for 5ZTM CSU: Contacts of Structural Units for 5ZTM Structure Factors (417 Kb) Retrieve 5ZTM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5ZTM from S2C, [Save to disk]

View 5ZTM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5ZTM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ztm_A] [5ztm_C] [5ztm_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5ZTM

Community annotation for 5ZTM at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---