OCA Atlas for 5ZVT

5ZVT

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MYR

enzyme

Gene
Ontology

Chain	Function	Process	Component
G, M, I, O, K, A, C, E, S, Q
J, P, L, D, B, N, H, F, R, T	host cell surface binding
V, U
W	mRNA (guanine-N7-)-methyltra...
X, Y

Primary reference

Structure of RNA polymerase complex and genome within a dsRNA virus provides insights into the mechanisms of transcription and assembly., Wang X, Zhang F, Su R, Li X, Chen W, Chen Q, Yang T, Wang J, Liu H, Fang Q, Cheng L, Proc Natl Acad Sci U S A. 2018 Jul 10;115(28):7344-7349. doi:, 10.1073/pnas.1803885115. Epub 2018 Jun 25. PMID:29941585

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1629 Kb) [Save to disk]

Biological Unit Coordinates (5zvt.pdb1.gz) 95282 Kb

LPC: Ligand-Protein Contacts for 5ZVT

CSU: Contacts of Structural Units for 5ZVT

Retrieve 5ZVT in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5ZVT from S2C, [Save to disk]

View 5ZVT in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5zvt_A] [5zvt_B] [5zvt_C] [5zvt_D] [5zvt_E] [5zvt_F] [5zvt_G] [5zvt_H] [5zvt_I] [5zvt_J] [5zvt_K] [5zvt_L] [5zvt_M] [5zvt_N] [5zvt_O] [5zvt_P] [5zvt_Q] [5zvt_R] [5zvt_S] [5zvt_T] [5zvt_U] [5zvt_V] [5zvt_W] [5zvt_X] [5zvt_Y] [5zvt_b] [5zvt_d] [5zvt_f] [5zvt_h] [5zvt_j] [5zvt_l] [5zvt_n] [5zvt_p] [5zvt_r] [5zvt_t]

SWISS-PROT database:

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