5ZW2 Biosynthetic Protein date May 14, 2018
title Fad Complex Of Piga
authors C.C.Lee, T.P.Ko, A.H.J.Wang
compound source
Molecule: L-Prolyl-[Peptidyl-Carrier Protein] Dehydrogenase
Chain: A
Synonym: Proline Oxidase,Flavoprotein Desaturase Piga,L-Pro Dehydrogenase;
Ec: 1.3.8.14
Engineered: Yes
 Organism_scientific: Serratia Sp. (Strain Atcc 39006)
Organism_taxid: 104623
Strain: Atcc 39006
Gene: Piga
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.143 R_Free 0.174
crystal
cell
length a length b length c angle alpha angle beta angle gamma
85.014 85.820 145.744 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACT, CL, EDO, FAD, O4B enzyme Oxidoreductase E.C.1.3.8.14 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of PigA, a prolyl thioester-oxidizing enzyme in prodigiosin biosynthesis., Lee CC, Ko TP, Chen CT, Chan YT, Lo SY, Chang JY, Chen YW, Chung TF, Hsieh HJ, Hsiao CD, Wang AH, Chembiochem. 2018 Aug 10. doi: 10.1002/cbic.201800409. PMID:30095206
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (5zw2.pdb1.gz) 288 Kb
  • LPC: Ligand-Protein Contacts for 5ZW2
  • CSU: Contacts of Structural Units for 5ZW2
  • Structure Factors (278 Kb)
  • Retrieve 5ZW2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZW2 from S2C, [Save to disk]
    • View 5ZW2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5ZW2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zw2_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5ZW2
  • Community annotation for 5ZW2 at PDBWiki (http://pdbwiki.org)

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