5EQ9 Biosynthetic Protein date Nov 12, 2015
title Crystal Structure Of Medicago Truncatula Histidinol-Phosphat Phosphatase (Mthpp) In Complex With L-Histidinol Phosphate
authors M.Ruszkowski, Z.Dauter
compound source
Molecule: Inositol Monophosphatase
Chain: A, B, C, D
Engineered: Yes
Organism_scientific: Medicago Truncatula
Organism_common: Barrel Medic
Organism_taxid: 3880
Gene: Mtr_3g117220
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21 Gold
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg68
symmetry Space Group: P 1 21 1
R_factor 0.116 R_Free 0.156
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.885 89.802 92.593 90.00 97.07 90.00
method X-Ray Diffractionresolution 1.36 Å
ligand GOL, HSA, MG enzyme
Gene MTR
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural studies of Medicago truncatula histidinol-phosphate phosphatase from inositol monophosphatase superfamily reveal details of penultimate step of histidine biosynthesis in plants., Ruszkowski M, Dauter Z, J Biol Chem. 2016 Mar 18. pii: jbc.M115.708727. PMID:26994138
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (380 Kb) [Save to disk]
  • Biological Unit Coordinates (5eq9.pdb1.gz) 190 Kb
  • Biological Unit Coordinates (5eq9.pdb2.gz) 188 Kb
  • LPC: Ligand-Protein Contacts for 5EQ9
  • CSU: Contacts of Structural Units for 5EQ9
  • Structure Factors (4524 Kb)
  • Retrieve 5EQ9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EQ9 from S2C, [Save to disk]
  • Re-refined 5eq9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EQ9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5EQ9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5eq9_A] [5eq9_C] [5eq9_B] [5eq9_D] [5eq9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5EQ9
  • Community annotation for 5EQ9 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science