5S64 Cell Cycle date Nov 08, 2020
title Tubulin-Z28870646-Complex
authors T.Muehlethaler, D.Gioia, A.E.Prota, M.E.Sharpe, A.Cavalli, M.O.St
compound source
Molecule: Tubulin Alpha-1b Chain
Chain: A, C
Synonym: Alpha-Tubulin Ubiquitous,Tubulin K-Alpha-1,Tubulin Ubiquitous Chain;
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Brain

Molecule: Tubulin Beta-2b Chain
Chain: B, D

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Brain

Molecule: Stathmin-4
Chain: E
Synonym: Stathmin-Like Protein B3,Rb3
Engineered: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Gene: Stmn4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid

Molecule: Tubulin-Tyrosine Ligase
Chain: F
Engineered: Yes

Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Gene: Ttl
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: P 21 21 21
R_factor 0.214 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
104.620 158.420 179.970 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.75 Å
ligand ACP, CA, GDP, GTP, MES, MG, TVP enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (776 Kb) [Save to disk]
  • Biological Unit Coordinates (5s64.pdb1.gz) 745 Kb
  • LPC: Ligand-Protein Contacts for 5S64
  • CSU: Contacts of Structural Units for 5S64
  • Structure Factors (713 Kb)
  • Retrieve 5S64 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5S64 from S2C, [Save to disk]
  • View 5S64 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5S64
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5s64 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5s64_F] [5s64_C] [5s64_E] [5s64_D] [5s64_B] [5s64_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5S64
  • Community annotation for 5S64 at PDBWiki (http://pdbwiki.org)

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