5VEW Structure of the human GLP-1 receptor complex with PF-06372222 date
authors Song, G., Yang, D., Wang, Y., Graaf, C.D., Zhou, Q., Jiang, S., Liu, K., Cai, X., Dai, A., Lin, G., Liu, D., Wu, F., Wu, Y., Zhao, S., Ye, L., Han, G.W., Lau, J., Wu, B., Hanson, M.A., Liu, Z.J., Wang, M.W., Stevens, R.C.
compound source
symmetry
R_factor
R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
ligand 97Y, CSD, OLA, OLC enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (301 Kb) [Save to disk]
  • Biological Unit Coordinates (5vew.pdb1.gz) 147 Kb
  • Biological Unit Coordinates (5vew.pdb2.gz) 149 Kb
  • LPC: Ligand-Protein Contacts for 5VEW
  • CSU: Contacts of Structural Units for 5VEW
  • Structure Factors (1158 Kb)
  • Retrieve 5VEW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VEW from S2C, [Save to disk]
  • Re-refined 5vew structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5VEW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5VEW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5vew from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vew] [5vew_B] [5vew_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5VEW
  • Community annotation for 5VEW at PDBWiki (http://pdbwiki.org)

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