5ZOB	Hydrolase Hydrolase Inhibitor	date	Apr 12, 2018
title	Crystal Structure Of Zika Ns3 Protease With 4-Guanidinomethy Phenylacetyl-Arg-Arg-Arg-4-Amidinobenzylamide
authors	W.W.Phoo, M.Wirawan
compound		source
Molecule: Serine Protease Subunit Ns2b Chain: A, C, G, E Synonym: Ns2b Cofactor Ec: 3.4.21.91,3.6.1.15,3.6.4.13 Engineered: Yes		Organism_scientific: Zika Virus Organism_common: Zikv Organism_taxid: 64320 Strain: Mr 766 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Ns3 Protease Chain: B, D, H, F Engineered: Yes		Organism_scientific: Zika Virus (Strain Mr 766) Organism_common: Zikv Organism_taxid: 64320 Strain: Mr 766 Gene: Gp1, A2g93_63394gpgp1 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: 4-Guanidinomethyl-Phenylacetyl-Arg-Arg-Arg-4- Amidinobenzylamide; Chain: I, J Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 21 21 21	R_factor 0.257 R_Free 0.279
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.417 60.417 214.873 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	00S, 2UE	enzyme	Hydrolase E.C.3.4.21.91 BRENDA
Gene Ontology	Chain Function Process Component A, E, C, G F, B, H, D

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (250 Kb) [Save to disk] Biological Unit Coordinates (5zob.pdb1.gz) 120 Kb Biological Unit Coordinates (5zob.pdb2.gz) 121 Kb LPC: Ligand-Protein Contacts for 5ZOB CSU: Contacts of Structural Units for 5ZOB Structure Factors (849 Kb) Retrieve 5ZOB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5ZOB from S2C, [Save to disk]

View 5ZOB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5ZOB

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5zob_F] [5zob_I] [5zob_H] [5zob_G] [5zob_J] [5zob_A] [5zob_B] [5zob_E] [5zob_D] [5zob_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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