6A6D Transferase date Jun 27, 2018
title Crystal Structure Of The Complex Of Phosphopantetheine Adenylyltransferase From Acinetobacter Baumannii With Depho Coenzyme A At 2.90a Resolution
authors P.K.Singh, A.Gupta, P.Kaur, S.Sharma, T.P.Singh
compound source
Molecule: Phosphopantetheine Adenylyltransferase
Chain: A
Synonym: Dephospho-Coa Pyrophosphorylase,Pantetheine-Phosph Adenylyltransferase,Ppat;
Ec: 2.7.7.3
Engineered: Yes
Organism_scientific: Acinetobacter Baumannii (Strain Acicu)
Organism_taxid: 405416
Strain: Acicu
Gene: Coad, Acicu_00798
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: F 41 3 2
R_factor 0.177 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
216.479 216.479 216.479 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand COD, MG, SO4 enzyme Transferase E.C.2.7.7.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (6a6d.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 6A6D
  • CSU: Contacts of Structural Units for 6A6D
  • Structure Factors (66 Kb)
  • Retrieve 6A6D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6A6D from S2C, [Save to disk]
  • View 6A6D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6A6D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6a6d_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6A6D
  • Community annotation for 6A6D at PDBWiki (http://pdbwiki.org)

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