6A7A Oxidoreductase date Jul 02, 2018
title Akr1c1 Complexed With New Inhibitor With Novel Scaffold
authors X.Zheng, Y.Zhao, H.Zhang, Y.Chen
compound source
Molecule: Aldo-Keto Reductase Family 1 Member C1
Chain: A
Synonym: 20-Alpha-Hydroxysteroid Dehydrogenase,20-Alpha-Hsd Chlordecone Reductase Homolog Hakrc,Dihydrodiol Dehydrogena Dd1dd2,High-Affinity Hepatic Bile Acid-Binding Protein,Hba Dehydrogenase,Trans-1,2-Dihydrobenzene-1,2-Diol Dehydrogena
Ec: 1.1.1.-,1.1.1.149,1.1.1.112,1.3.1.20
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Akr1c1, Ddh, Ddh1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.155 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.124 83.517 48.938 90.00 90.32 90.00
method X-Ray Diffractionresolution 2.37 Å
ligand 9S0, NAP enzyme Oxidoreductase E.C.1.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (6a7a.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 6A7A
  • CSU: Contacts of Structural Units for 6A7A
  • Structure Factors (336 Kb)
  • Retrieve 6A7A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6A7A from S2C, [Save to disk]
  • View 6A7A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6A7A
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6a7a from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6a7a_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6A7A
  • Community annotation for 6A7A at PDBWiki (http://pdbwiki.org)

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