6ABO Nuclear Protein date Jul 23, 2018
title Human Xrcc4 And Iffo1 Complex
authors J.Li, L.Liu, H.Liang, Y.Liu, D.Xu
compound source
Molecule: Dna Repair Protein Xrcc4
Chain: A
Fragment: Unp Residues 1-213
Synonym: X-Ray Repair Cross-Complementing Protein 4
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Xrcc4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prsfduet

Molecule: Intermediate Filament Family Orphan 1
Chain: B
Fragment: Unp Residues 453-529
Synonym: Tumor Antigen Hom-Tes-103
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Iffo1, Iffo
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prsfduet
symmetry Space Group: C 2 2 21
R_factor 0.231 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.315 331.116 64.080 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.65 Å
ligand GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (6abo.pdb1.gz) 106 Kb
  • LPC: Ligand-Protein Contacts for 6ABO
  • CSU: Contacts of Structural Units for 6ABO
  • Structure Factors (636 Kb)
  • Retrieve 6ABO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ABO from S2C, [Save to disk]
    • View 6ABO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6ABO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6abo_B] [6abo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6ABO
  • Community annotation for 6ABO at PDBWiki (http://pdbwiki.org)

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