6AEC Transferase date Aug 04, 2018
title Binary Complex Of Human Dna Polymerase Mu With Mnatp
authors Y.K.Chang, W.J.Wu, M.D.Tsai
compound source
Molecule: Dna-Directed Dnarna Polymerase Mu
Chain: A
Synonym: Pol Mu,Terminal Transferase
Ec: 2.7.7.7
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Polm, Polmu
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.191 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
124.989 124.989 50.618 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.72 Å
ligand ATP, MN, SO4 enzyme Transferase E.C.2.7.7.7 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHuman DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn(2+)-Mediated Functions., Chang YK, Huang YP, Liu XX, Ko TP, Bessho Y, Kawano Y, Maestre-Reyna M, Wu WJ, Tsai MD, J Am Chem Soc. 2019 May 17. doi: 10.1021/jacs.9b01741. PMID:31067051
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (123 Kb) [Save to disk]
  • Biological Unit Coordinates (6aec.pdb1.gz) 117 Kb
  • LPC: Ligand-Protein Contacts for 6AEC
  • CSU: Contacts of Structural Units for 6AEC
  • Structure Factors (742 Kb)
  • Retrieve 6AEC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6AEC from S2C, [Save to disk]
  • View 6AEC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6AEC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6aec_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6AEC
  • Community annotation for 6AEC at PDBWiki (http://pdbwiki.org)

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