6AK7 Hydrolase date Aug 30, 2018
title Crystal Structure Of Ppm1k-N94k
authors R.D.Meisam, L.L.Guo, P.Xiao
compound source
Molecule: Protein Phosphatase 1k, Mitochondrial
Chain: A
Synonym: Pp2c Domain-Containing Protein Phosphatase 1k,Pp2c Mitochondrial Protein,Pp2c-Type Mitochondrial Phosphoprotei Phosphatase,Ptmp,Protein Phosphatase 2c Isoform Kappa,Pp2c-
Ec: 3.1.3.16
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ppm1k, Pp2cm
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 31 2 1
R_factor 0.192 R_Free 0.224
crystal
cell
length a length b length c angle alpha angle beta angle gamma
122.784 122.784 61.580 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.61 Å
ligand
enzyme Hydrolase E.C.3.1.3.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (6ak7.pdb1.gz) 44 Kb
  • CSU: Contacts of Structural Units for 6AK7
  • Structure Factors (366 Kb)
  • Retrieve 6AK7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6AK7 from S2C, [Save to disk]
  • View 6AK7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6AK7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6ak7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ak7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6AK7
  • Community annotation for 6AK7 at PDBWiki (http://pdbwiki.org)

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