6ANE Hydrolase date Aug 12, 2017
title Crystal Structure Of Ideonella Sakaiensis Pet Hydrolase
authors P.Galaz-Davison, M.Sotomayor, L.P.Parra, C.A.Ramirez-Sarmiento
compound source
Molecule: Poly(Ethylene Terephthalate) Hydrolase
Chain: A, B, C
Fragment: Residues 28-290
Synonym: Petase
Ec: 3.1.1.101
Engineered: Yes
Organism_scientific: Ideonella Sakaiensis (Strain 201-F6)
Organism_taxid: 1547922
Strain: 201-F6
Gene: Isf6_4831
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet24b
symmetry Space Group: C 2 2 21
R_factor 0.177 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.868 233.852 165.076 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.02 Å
ligand MG enzyme Hydrolase E.C.3.1.1.101 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceActive Site Flexibility as a Hallmark for Efficient PET Degradation by I. sakaiensis PETase., Fecker T, Galaz-Davison P, Engelberger F, Narui Y, Sotomayor M, Parra LP, Ramirez-Sarmiento CA, Biophys J. 2018 Mar 27;114(6):1302-1312. doi: 10.1016/j.bpj.2018.02.005. PMID:29590588
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (6ane.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (6ane.pdb2.gz) 43 Kb
  • Biological Unit Coordinates (6ane.pdb3.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 6ANE
  • CSU: Contacts of Structural Units for 6ANE
  • Structure Factors (858 Kb)
  • Retrieve 6ANE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ANE from S2C, [Save to disk]
  • View 6ANE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ANE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ane_C] [6ane_A] [6ane_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ANE
  • Community annotation for 6ANE at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science