6AR1 Rna Binding Protein Rna Dna date Aug 21, 2017
title Structure Of A Thermostable Group II Intron Reverse Transcri Template-Primer And Its Functional And Evolutionary Implica (Rtduplex (Nat))
authors J.L.Stamos, A.M.Lentzsch, A.M.Lambowitz
compound source
Molecule: Gsi-Iic Rt
Chain: A, D
Engineered: Yes
Organism_scientific: Geobacillus Stearothermophilus
Organism_common: Bacillus Stearothermophilus
Organism_taxid: 1422
Gene: Trt
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Dna
Chain: B, E
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630

Molecule: Rna
Chain: C, F
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: C 1 2 1
R_factor 0.216 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
179.151 95.052 71.567 90.00 113.55 90.00
method X-Ray Diffractionresolution 3.01 Å
ligand DTP, MG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D


Primary referenceStructure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications., Stamos JL, Lentzsch AM, Lambowitz AM, Mol Cell. 2017 Nov 9. pii: S1097-2765(17)30799-2. doi:, 10.1016/j.molcel.2017.10.024. PMID:29153391
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (336 Kb) [Save to disk]
  • Biological Unit Coordinates (6ar1.pdb1.gz) 167 Kb
  • Biological Unit Coordinates (6ar1.pdb2.gz) 165 Kb
  • LPC: Ligand-Protein Contacts for 6AR1
  • CSU: Contacts of Structural Units for 6AR1
  • Structure Factors (345 Kb)
  • Retrieve 6AR1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6AR1 from S2C, [Save to disk]
  • View 6AR1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6AR1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ar1_D] [6ar1_C] [6ar1_F] [6ar1_B] [6ar1_A] [6ar1_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6AR1
  • Community annotation for 6AR1 at PDBWiki (http://pdbwiki.org)

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