6ASB Dna Binding Protein Dna date Aug 24, 2017
title Cxxc And Phd-Type Zinc Finger Regions Of Fbxl19 In Complex W
authors K.Liu, W.Tempel, J.R.Walker, C.H.Arrowsmith, C.Bountra, A.M.Edwar Structural Genomics Consortium (Sgc)
compound source
Molecule: Dna (5'-D(Gpcpcpapapcpgptptpgpgpc)-3'
Chain: A, B, D, E, G, H, J, K
Engineered: Yes
Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Other_details: Synthetic Dna

Molecule: F-Boxlrr-Repeat Protein 19
Chain: C, F, I, L
Fragment: Cxxc And Phd-Type Zinc Finger Regions (Unp Residu 153);
Synonym: F-Box And Leucine-Rich Repeat Protein 19
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fbxl19, Fbl19
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-V2r-Prare2
Expression_system_plasmid: Pet28-Mhl
symmetry Space Group: P 1
R_factor 0.213 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.729 64.282 67.324 103.53 104.66 99.40
method X-Ray Diffractionresolution 2.85 Å
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, C, I, L


Primary referenceDNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants., Xu C, Liu K, Lei M, Yang A, Li Y, Hughes TR, Min J, Structure. 2017 Dec 16. pii: S0969-2126(17)30396-9. doi:, 10.1016/j.str.2017.11.022. PMID:29276034
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (217 Kb) [Save to disk]
  • Biological Unit Coordinates (6asb.pdb1.gz) 57 Kb
  • Biological Unit Coordinates (6asb.pdb2.gz) 48 Kb
  • Biological Unit Coordinates (6asb.pdb3.gz) 59 Kb
  • Biological Unit Coordinates (6asb.pdb4.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 6ASB
  • CSU: Contacts of Structural Units for 6ASB
  • Structure Factors (1796 Kb)
  • Retrieve 6ASB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ASB from S2C, [Save to disk]
  • View 6ASB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ASB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6asb_D] [6asb_E] [6asb_A] [6asb_F] [6asb_B] [6asb_J] [6asb_C] [6asb_G] [6asb_I] [6asb_L] [6asb_H] [6asb_K]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ASB
  • Community annotation for 6ASB at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science