6ASO	Splicing	date	Aug 25, 2017
title	Structure Of Yeast U6 Snrnp With 3'-Phosphate Terminated U6
authors	E.J.Montemayor, D.A.Brow, S.E.Butcher
compound		source
Molecule: U4u6 Snrna-Associated-Splicing Factor Prp24 Chain: A Synonym: U4u6 Snrnp Protein Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Atcc 204508 S288c Gene: Prp24, Ymr268c, Ym8156.10c Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: U6 Snrna-Associated Sm-Like Protein Lsm2 Chain: B Synonym: Small Nuclear Ribonucleoprotein D Homolog Snp3 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Atcc 204508 S288c Gene: Lsm2, Smx5, Snp3, Ybl026w, Ybl0425 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: U6 Snrna-Associated Sm-Like Protein Lsm3 Chain: C Synonym: Smx4 Protein Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Atcc 204508 S288c Gene: Lsm3, Smx4, Uss2, Ylr438c-A Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: U6 Snrna-Associated Sm-Like Protein Lsm4 Chain: D Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Atcc 204508 S288c Gene: Lsm4, Sdb23, Uss1, Yer112w Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: U6 Snrna-Associated Sm-Like Protein Lsm5 Chain: E Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Atcc 204508 S288c Gene: Lsm5, Yer146w Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: U6 Snrna-Associated Sm-Like Protein Lsm6 Chain: F Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Yjm789 Gene: Lsm6, Scy_1265 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: U6 Snrna-Associated Sm-Like Protein Lsm7 Chain: G Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Atcc 204508 S288c Gene: Lsm7, Ynl147w, N1202, N1780 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: U6 Snrna-Associated Sm-Like Protein Lsm8 Chain: H Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Atcc 204508 S288c Gene: Lsm8, Yjr022w, J1464, Yjr83.16 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Saccharomyces Cerevisiae Strain Hb_s_gimblettroad Chromosome Xii Sequence; Chain: I Engineered: Yes		Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae Organism_taxid: 4932
symmetry	Space Group: P 1 21 1	R_factor 0.195 R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma 94.197 77.390 118.614 90.00 105.91 90.00
method	X-Ray Diffraction	resolution	2.71 Å
ligand	K, MG, MN, UBD	enzyme
Gene Ontology	Chain Function Process Component A B C D E F G H
Primary reference	Architecture of the U6 snRNP reveals specific recognition of 3'-end processed U6 snRNA., Montemayor EJ, Didychuk AL, Yake AD, Sidhu GK, Brow DA, Butcher SE, Nat Commun. 2018 May 1;9(1):1749. doi: 10.1038/s41467-018-04145-4. PMID:29717126

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (292 Kb) [Save to disk] Biological Unit Coordinates (6aso.pdb1.gz) 282 Kb LPC: Ligand-Protein Contacts for 6ASO CSU: Contacts of Structural Units for 6ASO Structure Factors (793 Kb) Retrieve 6ASO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6ASO from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6aso_E] [6aso_F] [6aso_B] [6aso_G] [6aso_I] [6aso_C] [6aso_H] [6aso_D] [6aso_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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