6AW3 Cell Adhesion date Sep 05, 2017
title Crystal Structure Of The Hopq-Ceacam3 L44q Complex
authors D.A.Bonsor, E.J.Sundberg
compound source
Molecule: Hopq
Chain: B
Engineered: Yes
Organism_scientific: Helicobacter Pylori
Organism_taxid: 210
Gene: Hopq
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Carcinoembryonic Antigen-Related Cell Adhesion Mo
Chain: A
Synonym: Carcinoembryonic Antigen Cgm1
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ceacam3, Cd66d, Cgm1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 2 2 21
R_factor 0.242 R_Free 0.297
crystal
cell
length a length b length c angle alpha angle beta angle gamma
38.830 102.594 112.650 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.66 Å
Primary referenceThe Helicobacter pylori adhesin protein HopQ exploits the dimer interface of human CEACAMs to facilitate translocation of the oncoprotein CagA., Bonsor DA, Zhao Q, Schmidinger B, Weiss E, Wang J, Deredge D, Beadenkopf R, Dow B, Fischer W, Beckett D, Wintrode PL, Haas R, Sundberg EJ, EMBO J. 2018 May 3. pii: embj.201798664. doi: 10.15252/embj.201798664. PMID:29724755
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk]
  • Biological Unit Coordinates (6aw3.pdb1.gz) 139 Kb
  • Biological Unit Coordinates (6aw3.pdb2.gz) 275 Kb
  • CSU: Contacts of Structural Units for 6AW3
  • Structure Factors (537 Kb)
  • Retrieve 6AW3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6AW3 from S2C, [Save to disk]
  • View 6AW3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6AW3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6aw3_B] [6aw3_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6AW3
  • Community annotation for 6AW3 at PDBWiki (http://pdbwiki.org)

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