6AWL Biosynthetic Protein date Sep 05, 2017
title Crystal Structure Of Human Coq9
authors C.A.Bingman, D.C.Lohman, R.W.Smith, D.J.Pagliarini, Mitochondria Partnership (Mpp)
compound source
Molecule: Ubiquinone Biosynthesis Protein Coq9, Mitochondri
Chain: A, B
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Coq9, C16orf49, Hspc326, Psec0129
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.197 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
38.110 97.390 63.650 90.00 95.40 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand BTB, PEF enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAn Isoprene Lipid-Binding Protein Promotes Eukaryotic Coenzyme Q Biosynthesis., Lohman DC, Aydin D, Von Bank HC, Smith RW, Linke V, Weisenhorn E, McDevitt MT, Hutchins P, Wilkerson EM, Wancewicz B, Russell J, Stefely MS, Beebe ET, Jochem A, Coon JJ, Bingman CA, Dal Peraro M, Pagliarini DJ, Mol Cell. 2019 Jan 15. pii: S1097-2765(18)31003-7. doi:, 10.1016/j.molcel.2018.11.033. PMID:30661980
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (6awl.pdb1.gz) 131 Kb
  • LPC: Ligand-Protein Contacts for 6AWL
  • CSU: Contacts of Structural Units for 6AWL
  • Structure Factors (624 Kb)
  • Retrieve 6AWL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6AWL from S2C, [Save to disk]
    • View 6AWL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6AWL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6awl_B] [6awl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6AWL
  • Community annotation for 6AWL at PDBWiki (http://pdbwiki.org)

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