6B42 Hydrolase date Sep 25, 2017
title Human Histidine Triad Nucleotide Binding Protein 1 (Hhint1) Amp Complex At 1.13a Resolution
authors K.M.Maize, B.C.Finzel
compound source
Molecule: Histidine Triad Nucleotide-Binding Protein 1
Chain: A
Synonym: Adenosine 5'-Monophosphoramidase,Protein Kinase C 1,Protein Kinase C-Interacting Protein 1,Pkci-1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hint1, Hint, Pkci1, Prkcnh1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta 2 Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg9
symmetry Space Group: P 43 21 2
R_factor 0.154 R_Free 0.160
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.738 39.738 141.133 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.13 Å
ligand D5M enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA Crystal Structure-Based Guide to the Design of Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) Activated ProTides., Maize KM, Shah R, Strom A, Kumarapperuma SC, Zhou AL, Wagner CR, Finzel BC, Mol Pharm. 2017 Oct 2. doi: 10.1021/acs.molpharmaceut.7b00664. PMID:28968488
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (6b42.pdb1.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 6B42
  • CSU: Contacts of Structural Units for 6B42
  • Structure Factors (3261 Kb)
  • Retrieve 6B42 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6B42 from S2C, [Save to disk]
  • View 6B42 in 3D
  • Proteopedia, because life has more than 2D.
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  • Visual 3D analysis of 6B42
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6b42_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6B42
  • Community annotation for 6B42 at PDBWiki (http://pdbwiki.org)

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