6B9H Protein Transport Motor Protein date Oct 10, 2017
title Complex Of Hook Domain With A Dynein Light Intermediate Chai
authors I.G.Lee, R.Dominguez
compound source
Molecule: Protein Hook Homolog 3
Chain: A
Synonym: Hhk3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hook3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Cytoplasmic Dynein 1 Light Intermediate Chain 1
Chain: B
Synonym: Lic1,Dynein Light Chain A,Dlc-A,Dynein Light Inter Chain 1,Cytosolic;
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.155 R_Free 0.179
crystal
cell
length a length b length c angle alpha angle beta angle gamma
31.715 35.372 126.149 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA conserved interaction of the dynein light intermediate chain with dynein-dynactin effectors necessary for processivity., Lee IG, Olenick MA, Boczkowska M, Franzini-Armstrong C, Holzbaur ELF, Dominguez R, Nat Commun. 2018 Mar 7;9(1):986. doi: 10.1038/s41467-018-03412-8. PMID:29515126
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (6b9h.pdb1.gz) 53 Kb
  • CSU: Contacts of Structural Units for 6B9H
  • Structure Factors (138 Kb)
  • Retrieve 6B9H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6B9H from S2C, [Save to disk]
    • View 6B9H in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6B9H
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6b9h_B] [6b9h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6B9H
  • Community annotation for 6B9H at PDBWiki (http://pdbwiki.org)

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