6BDF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
M, O, Q, G, U, C, I, E, 0, A, Y, S, W, K


V, L, J, F, N, X, B, H, Z, R, D, T, 1, P


Primary reference2.8 A resolution reconstruction of the Thermoplasma acidophilum 20S proteasome using cryo-electron microscopy., Campbell MG, Veesler D, Cheng A, Potter CS, Carragher B, Elife. 2015 Mar 11;4. doi: 10.7554/eLife.06380. PMID:25760083
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (908 Kb) [Save to disk]
  • Biological Unit Coordinates (6bdf.pdb1.gz) 904 Kb
  • CSU: Contacts of Structural Units for 6BDF
  • Retrieve 6BDF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BDF from S2C, [Save to disk]
    • View 6BDF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bdf_G] [6bdf_0] [6bdf_1] [6bdf_A] [6bdf_B] [6bdf_C] [6bdf_D] [6bdf_E] [6bdf_Q] [6bdf_F] [6bdf_H] [6bdf_I] [6bdf_J] [6bdf_K] [6bdf_L] [6bdf_M] [6bdf_N] [6bdf_O] [6bdf_P] [6bdf_R] [6bdf_S] [6bdf_T] [6bdf_U] [6bdf_V] [6bdf_W] [6bdf_X] [6bdf_Y] [6bdf_Z]
  • SWISS-PROT database:

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