6BFN Transferase date Oct 26, 2017
title Crystal Structure Of Human Irak1
authors L.Wang, Q.Qiao, H.Wu
compound source
Molecule: Interleukin-1 Receptor-Associated Kinase 1
Chain: A, B
Fragment: Unp Residues 194-530
Synonym: Irak-1
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Irak1, Irak
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 41 21 2
R_factor 0.184 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.059 88.059 177.034 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.26 Å
ligand
enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of human IRAK1., Wang L, Qiao Q, Ferrao R, Shen C, Hatcher JM, Buhrlage SJ, Gray NS, Wu H, Proc Natl Acad Sci U S A. 2017 Dec 5. pii: 1714386114. doi:, 10.1073/pnas.1714386114. PMID:29208712
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (210 Kb) [Save to disk]
  • Biological Unit Coordinates (6bfn.pdb1.gz) 105 Kb
  • Biological Unit Coordinates (6bfn.pdb2.gz) 103 Kb
  • CSU: Contacts of Structural Units for 6BFN
  • Structure Factors (990 Kb)
  • Retrieve 6BFN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BFN from S2C, [Save to disk]
  • View 6BFN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6BFN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6bfn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bfn_B] [6bfn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6BFN
  • Community annotation for 6BFN at PDBWiki (http://pdbwiki.org)

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