6BHG Crystal structure of SETDB1 with a modified H3 peptide date
authors Qin, S., Tempel, W., Dong, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.1761
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.45
ligand ALY, UNX enzyme
Primary referenceH3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1., Jurkowska RZ, Qin S, Kungulovski G, Tempel W, Liu Y, Bashtrykov P, Stiefelmaier J, Jurkowski TP, Kudithipudi S, Weirich S, Tamas R, Wu H, Dombrovski L, Loppnau P, Reinhardt R, Min J, Jeltsch A, Nat Commun. 2017 Dec 12;8(1):2057. doi: 10.1038/s41467-017-02259-9. PMID:29234025
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (6bhg.pdb1.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 6BHG
  • CSU: Contacts of Structural Units for 6BHG
  • Structure Factors (4363 Kb)
  • Retrieve 6BHG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BHG from S2C, [Save to disk]
  • View 6BHG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6BHG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bhg_B] [6bhg_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6BHG
  • Community annotation for 6BHG at PDBWiki (http://pdbwiki.org)

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