6BJC Cell Cycle date Nov 05, 2017
title Tpx2_mini Decorated Gmpcpp-Microtubule
authors R.Zhang, E.Nogales
compound source
Molecule: Tubulin Alpha-1b Chain
Chain: A, C, E, J, L, K
Synonym: Alpha-Tubulin Ubiquitous,Tubulin K-Alpha-1,Tubulin Ubiquitous Chain;
Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
Organ: Brain

Molecule: Tubulin Beta Chain
Chain: B, D, F, H, G, I
Synonym: Beta-Tubulin

Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
Organ: Brain

Molecule: Targeting Protein For Xklp2
Chain: T, P
Synonym: Differentially Expressed In Cancerous And Non-Canc Cells 2,Dil-2,Hepatocellular Carcinoma-Associated Antigen 5 Hepatocellular Carcinoma-Associated Antigen 90,Protein Fls3 Restricted Expression Proliferation-Associated Protein 100,
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tpx2, C20orf1, C20orf2, Dil2, Hca519
Expression_system: Spodoptera Aff. Frugiperda 2 Rz-2014
Expression_system_taxid: 1491790
Expression_system_strain: Sf21
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.30 Å
Gene
Ontology
ChainFunctionProcessComponent
A, J, K, E, C, L


F, B, H, D, I, G


T, P


Primary referenceStructural insight into TPX2-stimulated microtubule assembly., Zhang R, Roostalu J, Surrey T, Nogales E, Elife. 2017 Nov 9;6. pii: e30959. doi: 10.7554/eLife.30959. PMID:29120325
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (838 Kb) [Save to disk]
  • Biological Unit Coordinates (6bjc.pdb1.gz) 823 Kb
  • CSU: Contacts of Structural Units for 6BJC
  • Retrieve 6BJC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BJC from S2C, [Save to disk]
  • View 6BJC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6BJC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6bjc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bjc_D] [6bjc_E] [6bjc_B] [6bjc_J] [6bjc_A] [6bjc_K] [6bjc_P] [6bjc_F] [6bjc_H] [6bjc_L] [6bjc_C] [6bjc_G] [6bjc_I] [6bjc_T]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6BJC
  • Community annotation for 6BJC at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science