6BKK Membrane Protein date Nov 08, 2017
title Influenza A M2 Transmembrane Domain Bound To Amantadine
authors J.L.Thomaston, W.F.Degrado
compound source
Molecule: Matrix Protein 2
Chain: A, B, C, D, E, F, G, H
Engineered: Yes
Synthetic: Yes
Organism_scientific: Influenza A Virus
Organism_taxid: 11320
symmetry Space Group: P 1 21 1
R_factor 0.227 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.220 52.050 48.720 90.00 108.17 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 308, ACE, CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (6bkk.pdb1.gz) 17 Kb
  • Biological Unit Coordinates (6bkk.pdb2.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 6BKK
  • CSU: Contacts of Structural Units for 6BKK
  • Structure Factors (390 Kb)
  • Retrieve 6BKK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BKK from S2C, [Save to disk]
  • View 6BKK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6BKK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bkk_G] [6bkk_D] [6bkk_F] [6bkk_A] [6bkk_E] [6bkk_C] [6bkk_H] [6bkk_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6BKK
  • Community annotation for 6BKK at PDBWiki (http://pdbwiki.org)

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